WORKFLOW

1. Before sampling

Study design, networking and paperwork

1

Study design

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2

Network and sampling strategy

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3

Capture and sample export paperwork

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2. In the field

Respetuous animal handling and correct sample
obtaintion and storage

1

Animal captures

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2

Metadata collection

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3

Sample obtaintion

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4

Sample preservation

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3. In the lab

Secure sample storage and high-quality sample processing

1

Sample storage

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2

DNA extraction

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3

DNA shearing

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4

Sequencing library preparation

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5

DNA sequencing

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4. In the server

Efficient data processing and sound result generation

1

Quality-filtering

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2

Host genome profiling

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3

Metagenomic profiling

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Bioinformatic hologenomic approaches require reference genome sequences of host species to be available in order to split host DNA from metagenomic DNA and generate whole genome sequence profiles of analysed individuals. 


5. In the end

FAIR data, open source publications,
high-quality dissemination and inspiring outreach

Address

Center for Evolutionary Hologenomics, GLOBE Institute
University of Copenhagen
Ă˜ster Farimagsgade 5, 7
1353 Copenhagen K, Denmark

Contact

Coordinator: Antton Alberdi, PhD
Email: ehi@sund.ku.dk